Starting RNA Velocity or Trying to Use Scanpy
November, 13 2021

The first step…trying to get scanpy…

pip install scanpy

This basically failed… I needed python tables and thank the lord for this

I can finally start…haha I lied

c:\users\melton\appdata\local\programs\python\python39\lib\site-packages\tables\__init__.py in <module>
     12 
     13 # Necessary imports to get versions stored on the cython extension
---> 14 from .utilsextension import (
     15     get_pytables_version, get_hdf5_version, blosc_compressor_list,
     16     blosc_compcode_to_compname_ as blosc_compcode_to_compname,

tables\utilsextension.pyx in init tables.utilsextension()

__init__.pxd in numpy.import_array()

ImportError: numpy.core.multiarray failed to import

okay now for some reason… I am updating my visual studio to 2022, according to this

LOOOOOOOOOOL ok I did when I just used the same link above to install h5py. thank the lord

pip install scanpy

–> finally worked :)

Melton Zheng
November 13 2021
Load comments 

Okay, so I’m premed who likes to code, so I’m just gonna start now. I did a question yesterday on binary search and I will attempt to answer it again right now. Binary Search {% highlight python %} def binary_search(nums, target): left = 0 right = len(nums) - 1 while(left < right): mid = int((left+right)/2) if( nums[mid] < target ): left = mid + 1 elif( nums[mid] > target ):...
read more

Nov 2021
next

Damn it was hella easy to start a blog. All I did was follow the steps here and I was able to make some posts and talk about myself. The reason I wanted to create a blog was to essentially make an online journal noting my achievements and failures and to show other human beings that I actually do some kind of work. Anyways. Go ahead and look through these...
read more

prev
Popular
Years